Visium_data_analysis

R Python Bash

Collection of R packages to analyse Visium data

This environnement is installed on :
Bego

Bego


Directly hosted at IPMC, Bego offers the possibility to run statistical analyses by running Python notebooks via VSCode software and SSH remote connexion, as well as by connecting to the Rstudio server

Configuration : HPE DL380 2 x Xeon-G 6248 2x20 cores, 2Tb RAM, 40Tb disk, 1 GPU Nvidia A100, Debian

Guidelines : To connect to Bego, you will need to be granted a Linux account by Kevin Lebrigand (lebrigand@ipmc.cnrs.fr) which is Bego's administrator. To use Bego, you need to be comfortable with the Linux command line and the rules of good practice on a shared computing cluster.



Carra

Carra


Directly hosted at IPMC, Carra offers the possibility to run statistical analyses by running Python jupyter notebooks via SSH remote connexion, as well as by connecting to the Rstudio server

Configuration : DELL PowerEdge R440, Xeon 4 cores, 128Gb RAM, 10 Tb disk, Debian

Guidelines : To connect to Carra, you will need to be granted a Linux account by Kevin Lebrigand (lebrigand@ipmc.cnrs.fr) which is Carra's administrator. To use Carra, you need to be comfortable with the Linux command line and the rules of good practice on a shared computing cluster.